Blar i Nord Open Research Archive på forfatter "Fernandes, Jorge Manuel de Oliveira"
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Adherent intestinal cells from Atlantic salmon show phagocytic ability and express macrophage-specific genes
Park, Youngjin; Zhang, Qirui; Wiegertjes, Geert Frits; Fernandes, Jorge Manuel de Oliveira; Kiron, Viswanath (Peer reviewed; Journal article, 2020)Our knowledge of the intestinal immune system of fish is rather limited compared to mammals. Very little is known about the immune cells including the phagocytic cells in fish intestine. Hence, employing imaging flow ... -
Antibiotic-induced perturbations are manifested in the dominant intestinal bacterial phyla of atlantic salmon
Gupta, Shruti; Fernandes, Jorge Manuel de Oliveira; Kiron, Viswanath (Peer reviewed; Journal article, 2019)The intestinal microbiota of certain farmed fish are often exposed to antimicrobial substances, such as antibiotics, that are used to prevent and treat bacterial diseases. Antibiotics that kill or inhibit the growth of ... -
Biosystematics and evolutionary genomics of deep-sea fish (lumpsuckers, snailfishes, and sculpins) (Perciformes: Cottoidei)
Pinninti, Likith Reddy (PhD in Aquatic Biosciences;no. 51, Doctoral thesis, 2023) -
Breeding strategy shapes the composition of bacterial communities in female Nile tilapia reared in a recirculating aquaculture system
Abdelhafiz, Yousri Abdelmutalab Ahmed; Fernandes, Jorge Manuel de Oliveira; Larger, Simone; Albanese, Davide; Donati, Claudio; Jafari, Omid; Nedoluzhko, Artem; Kiron, Viswanath (Peer reviewed; Journal article, 2021) -
Brewer’s spent dry yeast modulates immunity in gilthead sea bream (Sparus aurata)
Konstantinidis, Ioannis; Firmino, Joana P.; Ruiz, Alberto; Iñarra, Bruno; Martin, David S.; Estévez, Alicia; Fernandes, Jorge Manuel de Oliveira; Gisbert, Enric (Peer reviewed; Journal article, 2022) -
Changes in intestinal microbiota, immune- and stress-related transcript levels in Senegalese sole (Solea senegalensis) fed plant ingredient diets intercropped with probiotics or immunostimulants
Batista, Sonia; Ozorio, Rodrigo O.A.; Kollias, Spyros; Dhanasiri, Anusha K.S.; Lokesh, Jep; Kiron, Viswanath; Valente, Luisa M.P.; Fernandes, Jorge Manuel de Oliveira (Journal article; Peer reviewed, 2016)Senegalese sole (Solea senegalensis) is a highly valued flatfish that grows well with diets containing plant ingredients but their effects on immune competence is still a matter of debate. The current study aimed to examine ... -
Characterization of circular RNAs in Nile tilapia muscle and thermal modulation of their expression in relation to growth
Rbbani, Md. Golam (PhD in Biosciences;no. 57, Doctoral thesis, 2023) -
CircParser : a novel streamlined pipeline for circular RNA structure and host gene prediction in non-model organisms
Nedoluzhko, Artem; Sharko, Fedor S.; Rbbani, Md Golam; Teslyuk, Anton; Konstantinidis, Ioannis; Fernandes, Jorge Manuel de Oliveira (Peer reviewed; Journal article, 2020)Circular RNAs (circRNAs) are long noncoding RNAs that play a significant role in various biological processes, including embryonic development and stress responses. These regulatory molecules can modulate microRNA activity ... -
CircPrime : a web‑based platform for design of specific circular RNA primers
Sharko, Fedor; Rbbani, Md Golam; Siriyappagouder, Prabhugouda; Raeymaekers, Joost A.M.; Galindo-Villegas, Jorge; Nedoluzhko, Artem; Fernandes, Jorge Manuel de Oliveira (Peer reviewed; Journal article, 2023)Background: Circular RNAs (circRNAs) are covalently closed-loop RNAs with critical regulatory roles in cells. Tens of thousands of circRNAs have been unveiled due to the recent advances in high throughput RNA sequencing ... -
Circular RNAs as potential growth biomakers in Nile Tilapia
Nedoluzhko, Artem; Siriyappagouder, Prabhugouda; Sharko, Fedor S.; Galindo-Villegas, Jorge; Raeymaekers, Joost A.M.; Fernandes, Jorge Manuel de Oliveira; Rabbani, Md Golam (Conference object, 2022) -
Comparative and functional analysis of microRNAs during zebrafish gonadal development
Presslauer, Christopher Edward (PhD in Aquatic Biosciences;no. 17, Doctoral thesis, 2017) -
The complete mitochondrial genome of the Atlantic spiny lumpsucker Eumicrotremus spinosus (Fabricius, 1776)
Pinninti, Likith Reddy; Maurstad, Marius Filomeno; Hoff, Siv Nam Khang; Kristensen, Torstein; Noble, Leslie Robert; Jentoft, Sissel; Fernandes, Jorge Manuel de Oliveira (Peer reviewed; Journal article, 2023) -
Development and validation of a liquid chromatography high-resolution mass spectrometry method for the simultaneous determination of mycotoxins and phytoestrogens in plant-based fish feed and exposed fish
Johny, Amritha; Fæste, Christiane Kruse; Bogevik, André Sture; Berge, Gerd Marit; Fernandes, Jorge Manuel de Oliveira; Ivanova, Lada (Journal article; Peer reviewed, 2019) -
Diet-induced inflammation in zebrafish and its alleviation by functional oligo- and polysaccharides
Rehman, Saima (PhD in Aquatic Biosciences;no. 54, Doctoral thesis, 2023) -
Dietary protein complexity modulates growth, protein utilisation and the expression of protein digestion-related genes in Senegalese sole larvae
Canada, Paula; Conceição, Luis E.C.; Mira, Sara; Teodosio, Rita; Fernandes, Jorge Manuel de Oliveira; Barrios, Carmen; Millan, Francisco; Pedroche, Justo; Valente, Luisa M.P.; Engrola, Sofia (Journal article; Peer reviewed, 2017) -
Differences in the fast muscle methylome provide insight into sex-specific epigenetic regulation of growth in Nile tilapia during early stages of domestication
Podgorniak, Tomasz Krzysztof; Brockmann, Sven; Konstantinidis, Ioannis; Fernandes, Jorge Manuel de Oliveira (Journal article; Peer reviewed, 2019) -
Digestive tract morphology and enzyme activities of juvenile diploid and triploid Atlantic salmon (Salmo salar) fed fishmealbased diets with or without fish protein hydrolysates
Martinez-Llorens, Silvia; Peruzzi, Stefano; Falk-Petersen, Inger-Britt; Godoy-Olmos, Sergio; Ulleberg, Lars Olav; Tomas-Vidal, Ana; Puvanendran, Velmurugu; Odei, Derrick Kwame; Hagen, Ørjan; Fernandes, Jorge Manuel de Oliveira; Jobling, Malcolm (Peer reviewed; Journal article, 2021)Triploid, sterile Atlantic salmon (Salmo salar) could make a contribution to the development of the farming industry, but uncertainties about the performance and welfare of triploids have limited their adoption by farmers. ... -
Distribution of the order Lampriformes in the Mediterranean Sea with notes on their biology, morphology, and taxonomy
Albano, Marco; D’Iglio, Claudio; Spanò, Nunziacarla; Fernandes, Jorge Manuel de Oliveira; Savoca, Serena; Capillo, Gioele (Peer reviewed; Journal article, 2022) -
DNA hydroxymethylation and improved growth of Nile tilapia (Oreochromis niloticus) during domestication
Konstantinidis, Ioannis (PhD in Aquatic Biosciences;no. 36, Doctoral thesis, 2020)The worldwide demand for fish consumption is highly dependent on aquaculture production because commercial fishing reached its maximum exploitation since the 90’s. However, continued expansion of the aquaculture industry ... -
DNA hydroxymethylation differences underlie phenotypic divergence of somatic growth in Nile tilapia reared in common garden
Konstantinidis, Ioannis; Sætrom, Pål; Brieuc, Marine Servane Ono; Jakobsen, Kjetill Sigurd; Liedtke, Hannes; Pohlmann, Caroline; Tsoulia, Thomais; Fernandes, Jorge Manuel de Oliveira (Peer reviewed; Journal article, 2023)Phenotypic plasticity of metabolism and growth are essential for adaptation to new environmental conditions, such as those experienced during domestication. Epigenetic regulation plays a key role in this process but the ...