Browsing Nord Open Research Archive by Author "Nedoluzhko, Artem"
Now showing items 1-20 of 23
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The Biomarker and Therapeutic Potential of Circular Rnas in Schizophrenia
Nedoluzhko, Artem; Gruzdeva, Natalia; Sharko, Fedor S.; Rastorguev, Sergey M; Zakharova, Natalia V.; Kostyuk, Georgy; Ushakov, Vadim (Peer reviewed; Journal article, 2020)Circular RNAs (circRNAs) are endogenous, single-stranded, most frequently non-coding RNA (ncRNA) molecules that play a significant role in gene expression regulation. Circular RNAs can affect microRNA functionality, interact ... -
Breeding strategy shapes the composition of bacterial communities in female Nile tilapia reared in a recirculating aquaculture system
Abdelhafiz, Yousri Abdelmutalab Ahmed; Fernandes, Jorge Manuel de Oliveira; Larger, Simone; Albanese, Davide; Donati, Claudio; Jafari, Omid; Nedoluzhko, Artem; Kiron, Viswanath (Peer reviewed; Journal article, 2021) -
Characterization of circular RNAs in Nile tilapia muscle and thermal modulation of their expression in relation to growth
Rbbani, Md. Golam (PhD in Biosciences;no. 57, Doctoral thesis, 2023) -
CircParser : a novel streamlined pipeline for circular RNA structure and host gene prediction in non-model organisms
Nedoluzhko, Artem; Sharko, Fedor S.; Rbbani, Md Golam; Teslyuk, Anton; Konstantinidis, Ioannis; Fernandes, Jorge Manuel de Oliveira (Peer reviewed; Journal article, 2020)Circular RNAs (circRNAs) are long noncoding RNAs that play a significant role in various biological processes, including embryonic development and stress responses. These regulatory molecules can modulate microRNA activity ... -
CircPrime : a web‑based platform for design of specific circular RNA primers
Sharko, Fedor; Rbbani, Md Golam; Siriyappagouder, Prabhugouda; Raeymaekers, Joost A.M.; Galindo-Villegas, Jorge; Nedoluzhko, Artem; Fernandes, Jorge Manuel de Oliveira (Peer reviewed; Journal article, 2023)Background: Circular RNAs (circRNAs) are covalently closed-loop RNAs with critical regulatory roles in cells. Tens of thousands of circRNAs have been unveiled due to the recent advances in high throughput RNA sequencing ... -
Circular RNAs as potential growth biomakers in Nile Tilapia
Nedoluzhko, Artem; Siriyappagouder, Prabhugouda; Sharko, Fedor S.; Galindo-Villegas, Jorge; Raeymaekers, Joost A.M.; Fernandes, Jorge Manuel de Oliveira; Rabbani, Md Golam (Conference object, 2022) -
The complete chloroplast genome sequence of cultivated Prunus persica cv. ‘Sovetskiy’
Sharko, Fedor S.; Tsygankova, Svetlana V.; Mitrofanova, Irina; Boulygina, Eugenia S.; Slobodova, Natalia; Smykov, Anatoliy; Rastorguev, Sergey M; Nedoluzhko, Artem; Gladysheva-Azgari, Maria (Peer reviewed; Journal article, 2021) -
Embryonic temperature has long-term effects on muscle circRNA expression and somatic growth in Nile Tilapia
Rbbani, Md Golam; Murshed, Riaz; Siriyappagouder, Prabhugouda; Sharko, Fedor; Nedoluzhko, Artem; Joshi, Rajesh; Galindo-Villegas, Jorge; Raeymaekers, Joost A. M.; Fernandes, Jorge Manuel de Oliveira (Peer reviewed; Journal article, 2024)Embryonic temperature has a lasting impact on muscle phenotype in vertebrates, involving complex molecular mechanisms that encompass both protein-coding and non-coding genes. Circular RNAs (circRNAs) are a class of regulatory ... -
Epigenetic mapping of the somatotropic axis in Nile tilapia reveals differential DNA hydroxymethylation marks associated with growth
Konstantinidis, Ioannis; Anastasiadi, Dafni; Sætrom, Pål; Nedoluzhko, Artem; Mjelle, Robin; Podgorniak, Tomasz; Piferrer, Francesc; Fernandes, Jorge Manuel de Oliveira (Peer reviewed; Journal article, 2021)In vertebrates, the somatotropic axis comprising the pituitary gland, liver and muscle plays a major role in myogenesis. Its output in terms of muscle growth is highly affected by nutritional and environmental cues, and ... -
The first mitochondrial 5-methylcytosine map in a non-model teleost (Oreochromis niloticus) reveals extensive strand-specific and non-CpG methylation
Nedoluzhko, Artem; Mjelle, Robin; Renström, Maria; Skjærven, Kaja H.; Piferrer, Francesc; Fernandes, Jorge M.O. (Peer reviewed; Journal article, 2021) -
Function of circular RNAs in fish and their potential application as biomarkers
Rbbani, Md Golam; Nedoluzhko, Artem; Galindo-Villegas, Jorge; Fernandes, Jorge Manuel de Oliveira (Peer reviewed; Journal article, 2021) -
Genetic contribution of domestic European common carp (Cyprinus carpio carpio) and Amur carp (Cyprinus carpio haematopterus) to the wild Vietnamese carp population as revealed by ddRAD sequencing
Nedoluzhko, Artem; Gladysheva-Azgari, Maria V.; Shalgimbayeva, Gulmira M.; Volkov, Alexander A.; Slobodova, Natalia V.; Tsygankova, Svetlana V.; Boulygina, Eugenia S.; Nguyen, Van Q.; Pham, The T.; Nguyen, Duc T.; Sharko, Fedor S.; Rastorguev, Sergey M. (Peer reviewed; Journal article, 2021)At least three subspecies of the common carp, namely, Cyprinus carpio carpio, C. carpio haematopterus, and C. carpio viridiviolaceus, have been described to date. These subspecies natively inhabit Ponto-Caspian and Far ... -
Genetic Investigation of Aral Wild Common Carp Populations (Cyprinus carpio) Using ddRAD Sequencing
Shalgimbayeva, Gulmira; Volkov, Alexander; Slobodova, Natalia; Sharko, Fedor S.; Tsygankova, Svetlana V.; Boulygina, Eugenia S.; Nguyen, Van Q.; Pham, Thế T.; Nguyen, Duc T.; Assylbekova, Saule Zh.; Alekseev, Yakov; Nedoluzhko, Artem; Fernandes, Jorge Manuel de Oliveira; Rastorguev, Sergey (Peer reviewed; Journal article, 2021)Common carp (Cyprinus carpio) is a widespread freshwater fish species of the Cyprinidae family, one of the largest and most diverse fish families. The natural habitats of C. carpio extend from Western Europe to South-East ... -
Genetic structure of marine and lake forms of Pacific herring Clupea pallasii
Orlova, Svetlana; Rastorguev, Sergey; Bagno, Tatyana; Kurnosov, Denis; Nedoluzhko, Artem (Peer reviewed; Journal article, 2021) -
Genomic evidence supports the introgression between two sympatric stickleback species inhabiting the White Sea basin
Nedoluzhko, Artem; Sharko, Fedor; Tsygankova, Svetlana; Boulygina, Eugenia; Ibragimova, Amina; Teslyuk, Anton; Galindo-Villegas, Jorge; Rastorguev, Sergey (Peer reviewed; Journal article, 2021) -
Genomic signatures of freshwater adaptation in Pacific herring (Clupea pallasii)
Nedoluzhko, Artem; Orlova, Svetlana; Sharko, Fedor; Galindo-Villegas, Jorge; Rastorguev, Sergey (Peer reviewed; Journal article, 2022)Pacific herring (Clupea pallasii) is an essential target of commercial fishing in the North Pacific Ocean. Previous studies have suggested the existence of marine and lake ecological forms of this species within its range. ... -
Intergeneric Hybridization of Two Stickleback Species Leads to Introgression of Membrane-Associated Genes and Invasive TE Expansion
Nedoluzhko, Artem; Sharko, Fedor; Tsyganova, Svetlana; Boulygina, Eugenia S.; Slobodova, Natalia; Teslyuk, Anton; Galindo-Villegas, Jorge; Rastorguev, Sergey (Peer reviewed; Journal article, 2022)Interspecific hybridization has occurred relatively frequently during the evolution of vertebrates. This process usually abolishes reproductive isolation between the parental species. Moreover, it results in the exchange ... -
Major gene expression changes and epigenetic remodelling in Nile tilapia muscle after just one generation of domestication
Konstantinidis, Ioannis; Sætrom, Pål; Mjelle, Robin; Nedoluzhko, Artem; Robledo, Diego; Fernandes, Jorge Manuel de Oliveira (Peer reviewed; Journal article, 2020)The historically recent domestication of fishes has been essential to meet the protein demands of a growing human population. Selection for traits of interest during domestication is a complex process whose epigenetic basis ... -
Mitochondrial and Y-chromosome diversity of the prehistoric Koban culture of the North Caucasus
Boulygina, Eugenia S.; Tsygankova, Svetlana V.; Sharko, Fedor S.; Slobodova, Natalia; Gruzdeva, Natalia; Rastorguev, Sergey M; Belinsky, Andrej; Härke, Heinrich; Kadieva, Anna; Demidenko, Sergej; Shvedchikova, Tatiana; Dobrovolskaya, Maria; Reshetova, Irina; Korobov, Dmitry; Nedoluzhko, Artem (Peer reviewed; Journal article, 2020)The Koban archaeological culture is a well-known Northern and Central Caucasus culture that has been widely distributed throughout this region during the end of Bronze Age, and the beginning of the Iron Age. Named after ... -
New insights into the human brain’s cognitive organization : Views from the top, from the bottom, from the left and, particularly, from the right
Velichkovsky, Boris; Nedoluzhko, Artem; Goldberg, Elkhonon; Efimova, Olga; Sharko, Fedor S.; Rastorguev, Sergey M; Krasivskaya, Anna; Sharaev, Maxim; Korosteleva, Anastasia; Ushakov, Vadim (Peer reviewed; Journal article, 2020)The view that the left cerebral hemisphere in humans “dominates” over the “subdominant” right hemisphere has been so deeply entrenched in neuropsychology that no amount of evidence seems able to overcome it. In this article, ...